AdaSampling - Adaptive Sampling for Positive Unlabeled and Label Noise Learning
Implements the adaptive sampling procedure, a framework for both positive unlabeled learning and learning with class label noise. Yang, P., Ormerod, J., Liu, W., Ma, C., Zomaya, A., Yang, J. (2018) <doi:10.1109/TCYB.2018.2816984>.
Last updated 6 years ago
5.04 score 11 stars 10 scripts 318 downloadsClueR - Cluster Evaluation
CLUster Evaluation (CLUE) is a computational method for identifying optimal number of clusters in a given time-course dataset clustered by cmeans or kmeans algorithms and subsequently identify key kinases or pathways from each cluster. Its implementation in R is called ClueR. See README on <https://github.com/PYangLab/ClueR> for more details. P Yang et al. (2015) <doi:10.1371/journal.pcbi.1004403>.
Last updated 1 years ago
4.23 score 10 stars 17 scripts 373 downloadsdirectPA - Direction Analysis for Pathways and Kinases
Direction analysis is a set of tools designed to identify combinatorial effects of multiple treatments/conditions on pathways and kinases profiled by microarray, RNA-seq, proteomics, or phosphoproteomics data. See Yang P et al (2014) <doi:10.1093/bioinformatics/btt616>; and Yang P et al. (2016) <doi:10.1002/pmic.201600068>.
Last updated 1 years ago
4.14 score 1 dependents 31 scripts 433 downloads